References [ 12 ]
Tanifuji G, Kim E, Onodera NT, Gibeault R, Dlutek M, Cawthorn RJ, Fiala I, Lukes J, Greenwood SJ & Archibald JM (2011) Genomic characterization of Neoparamoeba pemaquidensis (Amoebozoa) and its kinetoplastid endosymbiont. Eukaryotic Cell 10: 1143-1146.
DOI: 10.1128/EC.05027-11
Dykova I, Nowak BF, Peckova H, Fiala I, Crosbie PBB & Dvorakova H (2007) Phylogeny of Neoparamoeba strains isolated from marine fish and invertebrates as inferred from SSU rDNA sequences. Diseases of Aquatic Organisms 74: 57-65.
DOI: none
Fiala I & Dykova I (2003) Molecular characterisation of Neoparamoeba strains isolated from gills of Scophthalmus maximus Diseases of Aquatic Organisms 55: 11-16.
DOI: none
Wong FYK, Carson J & Elliott NG (2004) 18S ribosomal DNA-based PCR identification of Neoparamoeba pemaquidensis, the agent of amoebic gill disease in sea-farmed salmonids Diseases of Aquatic Organisms 60: 65-76.
DOI: none
Mullen TE, Nevis KR, O'Kelly CJ, Gast RJ & Frasca Jr. S (2005) Nuclear small-subunit ribosomal RNA gene-based characterization, molecular phylogeny and PCR detection of the Neoparamoeba from Western Long Island Sound lobster Journal of Shellfish Research 24: 719-731.
DOI: none
Kudryavtsev A (2014) Paravannella minima n. g. n. sp. (Discosea, Vannellidae) and distinction of the genera in the vannellid amoebae. European Journal of Protistology 50: 258-269.
David V, Flegontov P, Gerasimov E, Tanifuji G, Hashimi H, Logacheva MD, Maruyama S, Onodera NT, Gray MW, Archibald JM & Lukes J (2015) Gene loss and error-prone RNA editing in the mitochondrion of Perkinsela, an endosymbiotic kinetoplastid. mBio 6(6): e01498.
Volkova E & Kudryavtsev A (2017) Description of Neoparamoeba longipodia n. sp. and a new strain of Neoparamoeba aestuarina (Page, 1970) (Amoebozoa, Dactylopodida) from deep-sea habitats European Journal of Protistology 61: 107-121.
Tanifuji G, Cenci U, Moog D, Dean S, Nakayama T, David V, Fiala I, Curtis BA, Sibbald SJ, Onodera NT, Colp M, Flegontov P, Johnson-MacKinnon J, McPhee M, Inagaki Y, Hashimoto T, Kelly S, Gull K, Lukes J & Archibald JM (2017) Genome sequencing reveals metabolic and cellular interdependence in an amoebakinetoplastid symbiosis Scientific Reports 7: 11688.
Bondarenko N, Glotova A, Nassonova E, Marsharsky A, Kudryavtsev A & Smirnov A (2018) The complete mitochondrial genome of Vannella simplex (Amoebozoa, Discosea, Vannellida) European Journal of Protistology 63: 83-95.
Plonski NM, Bissoni B, Arachchilage MH, Romstedt K, Kooijman EE & Piontkivska H (2018) Shedding light on lipid metabolism in Kinetoplastida: A phylogenetic analysis of phospholipase D protein homologs Gene 656: 95-105.
Volkova E, Völcker E, Clauß S, Bondarenko N & Kudryavtsev A (2019) Paramoeba aparasomata n. sp., a symbiont-free species, and its relative Paramoeba karteshi n. sp. (Amoebozoa, Dactylopodida) European Journal of Protistology 71: 125630.
Division/Phylum: Amoebozoa Class: Discosea
Note: for strains where we have DNA barcodes we can be reasonably confident of identity, however for those not yet sequenced we rely on morphology
and the original identification, usually made by the depositor. Although CCAP makes every effort to ensure the correct taxonomic identity of strains, we cannot guarantee
that a strain is correctly identified at the species, genus or class levels. On this basis users are responsible for confirming the identity of the strain(s) they receive
from us on arrival before starting experiments.
For strain taxonomy we generally use AlgaeBase for algae and
Adl et al. (2019) for protists.
Culture media, purity and growth conditions:
Medium:
MY75S;
Bacteria present; maintained by serial subculture; 18-23 deg C
| Attributes | |
| Authority | Page 1987 |
| Isolator | Page (1976) |
| Collection Site | Criccieth, Gwynedd, Wales, UK |
| Climatic Zone | Temperate |
| Notes | Isolation: plating; clonal; this strain has a strong tendency to possess supernumerary parasomes. |
| Axenicity Status | Bacteria present |
| Area | Europe |
| Country | UK |
| Environment | Marine |
| GMO | No |
| Group | Protozoa |
| In Scope of Nagoya Protocol | No |
| ABS Note | Collected pre Nagoya Protocol. No known Nagoya Protocol restrictions for this strain. |
| Collection Date | c 1976 |
| Original Designation | 198 |
| Pathogen | Not pathogenic: Hazard Class 1 |
| Strain Maintenance Sheet | |
| Toxin Producer | Not Toxic / No Data |
| Type Culture | No |
| Taxonomy WoRMS ID | 120665 |
| Formerly Listed in CCAP as | Paramoeba pemaquidensis |
CCAP 1560/4
Neoparamoeba pemaquidensis
- Product Code: CCAP 1560/4
- Availability: See Availability/Lead Times