CCAP Publications
Scientific papers and other publications authored by CCAP staff and affiliated colleagues.
2024
Allen, R., Rad-Menéndez, C., Green, D.H. et al. (2024) The genome sequence of the chlorophyte Marvania coccoides CCAP 251/1B (Naumann) Henley, Hironaka, Guillou, M. Buchheim, J. Buchheim, M. Fawley & K. Fawley 2004. [version 1; peer review: awaiting peer review]. Wellcome Open Res, 9:334
10.12688/wellcomeopenres.22468.1
Allen, R., Rad-Menéndez, C., Green, D.H. et al. (2024) The genome sequence of the chlorophyte Pseudopediastrum boryanum CCAP 291/2 (Turpin) E. Hegewald 2005. [version 1; peer review: awaiting peer review]. Wellcome Open Res, 9:338
10.12688/wellcomeopenres.22472.1
Antonaru, L.A., Rad-Menéndez, C., Mbedi, S., Sparmann, S., Pope, M., Oliver, T., Wu, S., Green, D., Gugger, M. & Nürnberg, D.J. (2024) The ancient evolution of far-red light photoacclimation in cyanobacteria. bioRxiv, 2024-05.
10.1101/2024.05.15.594131
Darienko, T., Rad-Menéndez, C. & Pröschold, T. (2024) The new genus Caulinema revealed new insights into the generic relationship of the order Ulotrichales (Ulvophyceae, Chlorophyta). Microorganisms 12: 1604.
10.3390/microorganisms12081604
Nelson, D.R., Mystikou, A., Jaiswal, A., Rad-Menéndez, C., Preston, M.J., De Boever, F., El Assal, D.C., Daakour, S., Lomas, M.W., Twizere, J.-C., Green, D.H., Ratcliff, W.C. & Salehi-Ashtiani, K. (2024) Macroalgal deep genomics illuminate multiple paths to aquatic, photosynthetic multicellularity. Molecular Plant 17: 1-25
10.1016/j.molp.2024.03.011
Tan, J., Tan, P.-L., Poong, S.-W., Brakel, J., Rad Menendez, C., Sunarwidhi Prasedya, E., Sherwood, A. R., Msuya, F. E., Gachon, C., Brodie, J., Kassim, A. & Lim, P. E. (2024) Assessment of nine markers for phylogeny, species and haplotype identification of Kappaphycus species and Eucheuma denticulatum (Solieriaceae, Rhodophyta). European Journal of Phycology, 1-18.
10.1080/09670262.2024.2396324
2023
Rad-Menéndez, C., Green, D.H., Culture Collection of Algae and Protozoa collective et al. (2023) The genome sequence of the chlorophyte Dunaliella primolecta CCAP 11/34 (Butcher, 1959) [version 1; peer review: 2 approved with reservations]. Wellcome Open Res, 8:523
10.12688/wellcomeopenres.20190.1
Green, D.H., Rad-Menéndez, C., Campbell, C. et al. (2023) The genome sequence of Pycnococcus provasolii (CCAP190/2) (Guillard, 1991) [version 1; peer review: 2 approved]. Wellcome Open Res, 8:520
10.12688/wellcomeopenres.20345.1
Green, D.H., Rad-Menéndez, C., Culture Collection of Algae and Protozoa collective et al. (2023) The genome sequence of the Heterolobosean amoeboflagellate, Tetramitus jugosus CCAP 1588/3C [version 1; peer review: 3 approved]. Wellcome Open Res, 8:513
10.12688/wellcomeopenres.20189.1
Schmidt, K., Graeve, M., Hoppe, C.J.M., Torres-Valdes, S., Welteke, N., Whitmore, L.M., Anhaus, P., Atkinson, A., Belt, S.T., Brenneis, T., Campbell, R.G., Castellani, G., Copeman, L.A., Flores, H., Fong, A.A., Hildebrandt, N., Kohlbach, D., Nielsen, J.M., Parrish, C.C., Rad Menéndez, C., Rokitta, S.D., Tippenhauer, S. & Zhuang, Y. (2023) Essential omega-3 fatty acids are depleted in sea ice and pelagic algae of the Central Arctic Ocean. Global Change Biology: e17090.
10.1111/gcb.17090
Papadopoulos, K.P., de Souza, M.F., Archer, L., Illanes, A.C.Z., Harrison, E.L., Taylor, F., Davey, M.P., Gallardo, D.A., Komakech, A.J., Radmehr, S., Holzer, A., Meers, E., Smith, A.G. & Mehrshahi, P. (2023) Vitamin B12 bioaccumulation in Chlorella vulgaris grown on food waste-derived anaerobic digestate. Algal Research: 103290.
10.1016/j.algal.2023.103290
Slocombe, S.P., Zuniga-Burgos, T., Chu, L., Mehrshahi, P., Davey, M.P., Smith, A.G., Camargo-Valero, M.A. & Baker, A. (2023) Overexpression of PSR1 in Chlamydomonas reinhardtii induces luxury phosphorus uptake. Frontiers in Plant Science 14.
10.3389/fpls.2023.1208168
Wood, E.E., Ross, M.E., Jubeau, S., Montalescot, V., MacKechnie, K., Marchington, R.E., Davey, M.P., McNeill, S., Hamilton, C. & Stanley, M.S. (2023) From green to orange: The change in biochemical composition of phototrophic-mixotrophic Chromochloris zofingiensis in pilot-scale photobioreactors. Algal Research 75: 103238.
10.1016/j.algal.2023.103238
Read, S.K., Semião, A.J.C., Graham, M.C. & Ross, M. (2023) Live algal sorbents for the removal of potentially toxic elements: a review. Applied Phycology 4(1): 15-33.
10.1080/26388081.2022.2158132
Colesie, C., Walshaw, C.V., Garcia Sancho, L., Davey, M.P. & Gray, A. (2023) Antarctica’s vegetation in a changing climate. WIREs Climate Change 14(1), e810.
10.1002/wcc.810
Parati, M., Philip, C., Mendrek, B., Townrow, D., Khalil, I., Tchuenbou-Magaia, F., Stanley, M., Kowalczuk, M., Adamus, G. & Radecka, I. (2023) A circular bioprocess application of algal-based substrate for Bacillus subtilis natto production of y-PGA. Frontiers in Chemistry 11.
10.3389/fchem.2023.1158147
2022
Wood, E.E., Ross, M.E., Jubeau, S., Motalescot, V. & Stanley, M.S. (2022) Progress towards a targeted biorefinery of Chromochloris zofingiensis: a review. Biomass Conversion and Biorefinery.
10.1007/s13399-022-02955-7
Bombelli, P., Savanth, A., Scarampi, A., Rowden, S.J.L., Green, D.H., Erbe, A., Årstøl, E., Jevremovic, I., Hohmann-Marriott, M.F., Trasatti, S.P., Ozer, E. & Howe, C.J. (2022) Powering a microprocessor by photosynthesis. Energy & Environmental Science 15(6), 2529-2536.
10.1039/d2ee00233g
Llavero-Pasquina, M., Geisler, K., Holzer, A., Mehrshahi, P., Mendoza-Ochoa, G.I., Newsad, S.A., Davey, M.P. & Smith, A.G. (2022) Thiamine metabolism genes in diatoms are not regulated by thiamine despite the presence of predicted riboswitches. New Phytologist.
10.1111/nph.18296
Rizzo, A., Ross, M.E., Norici, A. & Jesus, B. (2022) A two-step process for improved biomass production and non-destructive astaxanthin and carotenoids accumulation in Haematococcus pluvialis. Applied Sciences 12(3), 1261.
10.3390/app12031261
Michalek, K., Kane, F., Stanley, M.S., Sánchez, I., Tarkan, S., Bizel, K.C., Malindretos, G. & Van Duren, L.A. (2022) EU Potential for IMTA Development. Policy Brief. Findings and recommendations from the IMPAQT Horizon 2020 Research and Innovation project.
impaqtproject.eu/
Nin-Pratt, A., Beveridge, M.C.M., Sulser, T.B., Marwaha, N., Stanley, M.S., Grisenthwaite, R. & Phillips, M.J. (2022) Cattle, seaweed, and global greenhouse gas emissions. IFPRI Discussion Paper 02111.
10.2499/p15738coll2.135065
Biancacci, C., Abell, R., McDougall, G.J., Day, J.G. & Stanley, M.S. (2022) Annual compositional variation in wild Osmundea pinnatifida (Hudson) Stackhouse from the west coast of Scotland. Journal of Applied Phycology 34, 1661-1675.
link.springer.com/journal/10811
2021
Sound, J.K., Peters, A., Bellamy-Carter, J., Rad-Menendez, C., MacKechnie, K., Green, D.H. & Leney, A.C.. (2021) Rapid cyanobacteria species identification with high sensitivity using native mass spectrometry. Analytical Chemistry 93, 14293-14299.
https://doi.org/10.1021/acs.analchem.1c03412
Darienko, T., Rad-Menéndez, C., Campbell, C.N. & Pröschold, T. (2021) Molecular phylogeny of unicellular marine coccoid green algae revealed new insights systematics of the Ulvophyceae (Chlorophyta). Microorganisms 9(8), 1586.
https://doi.org/10.3390/microorganisms9081586
Pröschold, T., Rieser, D., Darienko, T., Kammerlander, B., Pitsch, G., Bruni, E.P., Qu, Z., Forster, D., Rad-Menéndez, C., Posch, T., Stoeck, T. & Sonntag, B. (2021) An integrative approach sheds new light onto the systematics and ecology of the widespread ciliate genus Coleps (Ciliophora, Prostomatea). Scientific Reports 11, 5916.
https://doi.org/10.1038/s41598-021-84265-y
Hughes, A.H., Magot, F., Tawfike, A., Rad-Menéndez, C., Thomas, N., Young, L.C., Stucchi, L., Carettoni, D., Stanley, M.S., Edrada-Ebel, R. & Duncan, K.R. (2021) Exploring the Chemical Space of Macro- and Micro-Algae Using Comparative Metabolomics. Microorganisms 9(2), 311.
https://doi.org/10.3390/microorganisms9020311